Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890159.1_cds_XP_016444823.1_39842
CDS Infomation

[gene=LOC107770070] [db_xref=GeneID:107770070] [protein=probable beta-D-xylosidase 7] [protein_id=XP_016444823.1] [location=join(52851..53243,53971..54273,54693..54862,54988..55079,55456..56220,56328..56914)] [gbkey=CDS]
Sequence

ATGGGACTTCATAAAATTGCAGTGATCACCATTATCATCTCATTTCTCAGCTCTATTGAG
TCAACTCGTCCTCCATTTTCATGTGACGCGTCCAACCCAGTTACCAGAACATTTACATTC
TGTAACATATCATTACCCATCCCCCAAAGGGTAGAGGATCTAATTTCACACCTGAATTTG
GACGAGAAAATATCACAACTGGGTAACACTGCACCTGCCATTCCTCGGCTAAATATCTCT
GCTTACGAGTGGTGGTCGGAATCGTTACACGGCCTAACATATGCAGGAGAAGGGATGTCC
TTCAATGGCAGCATTAGAACTGCAACTCAGTTCCCTCAGATCATTCTTGCTGCTTCTACT
TTTGATGAACATCTCTGGTATCGCATTGCGCTGGCAATTTCAAGAGAGGCAAGAGCAGTA
TACAATACTGGTGAACTAAAGGGAATGACATTCTTTGCACCGAATATAAACATTCTAAGG
GACCCAAGATGGGGTAGAGCTCAAGAAACAGCAGGAGAAGACCCGATGATGGTAGGAAAA
TATGGAGTGGCTTATGTAAGAGGACTTCAAGGCGATAGTTTTCGAGGTGGAAAGCTCAGA
GATGGGCATCTTCAAGCCTCAGCTTGCTGTAAGCACTTTACAGCTCAGGATTTGGATCGC
TGGAATGGCCACTATCGTTTCACCTTCGATGCTCAGGTTACAGCGCAGGATATGGCAGAT
TCATTTCAACCACCATTCAAGAGTTGCGTGGAAGAAGGAAAAGCCACCAGTCTAATGTGT
GCTTATAGTCGTCTCAATGGTGTCTCTAACTGCGCTAACTATGATCTCCTGACTAAGACT
GTCCGTGGACAATGGGGTTTCAACGGTTCCATTGTATCAGATTGCGACGCAGTTCAGGTT
ATGCATGATCACCAGGGATACACAGTTGAAGATGCAGTTGCAGCTTCTCTCAAAGCTGGT
ATGGATGTAAACTGTGGTTCCTGCGTGAGAACCAACGCAAGATTAGCTTTGGAGAAGAAG
AAATTACAAGAATCCGATATAGACAGAGCTCTTCGCAATATCTTCTCTATTAGAATGAGG
TTAGGACTATTCAATGGTGACCCAAGAAAATTGGAATATGGAAACATTTCAACAGCAGAG
GTTTGTAGTCAGGAGCACCAGAAACTAGCCCTTGAAGCAGCAAGAAATGGCATTGTCCTT
TTGAAGAACTCTCCCAAACTCCTTCCACTTTCTAAGATCAAAACCACATCACTTGCTGTA
ATAGGTCCAAAAGCAAATGATGCTGAATTACTTTTAGGTAACTATGCAGGCATTCCATGC
AAGAATGTTTCGTTACTCCAAGGATTTCAGCACATAGTGAAAAACATACACAACCATCCG
GGCTGCAACTTTGTCAACTGTACTTCTGCTGCAACACATGAAGCAGTTGATGTTGCTAAA
AAGGCACAGTATGTTGTTTTAATAATGGGATTAGACCAGCGAATGGAGAGGGAGAGCTGG
GATCGCACAGAACTCGGGCTGCCTGGCCAGCAAGAGACTCTTATTAAAGCAGCAGCCAAG
GCTGCTGCTGAACCTGTTATACTTGTGTTGGTAGGTGGAGGTCCTATTGATATTTCTTTT
GCCAAGAACAACCCGAAAATCGGAGGCATCTTGTGGATTGGTTATCCTGGAGAGGCTGGA
GCAGCTGCACTAACACAGATCATTTTTGGAGAACATAATCCAGGGGGCAGGTTACCAGTG
ACTTGGTATCCCAAGGATTTCACAAAAGTACCAATGACAGACATGAACATGAGGCCTAAC
AAAACGATAGGATATCCAGGGCGAACGTACAGATTTTACAAAGGGACAAAAGTTTATGAA
TTTGGCTATGGCCTTAGTTACACTAGTTATTCATACAAGATTGACTCTGTCAATCATGAC
AAGGTCTACTTCAATAACCTAAAGACAGACAAGGCAGGAAAACATGGTTCACTTCTTAAT
GTAGCAGTTTCAGATATTGGATCAGAGGCTTGCAAAAAGGCTAAGATTTCAGTTAAGGTT
TTGGTGAAAAACAAGGGAAAAATAGCTGGTAAGCATCCTGTATTGTTGTTTCTTAGGCAT
TCCAAGGTGAGAGATGAGGTTCCAATAAAGCAGTTGATTGGGTTCAAGAGTGTACATTTA
GATGCAGGAGAAAAGACCAAAATCAAATTTGTGGTGAACCCTTGTGAACACTTCACTAGG
GCTAATGAACATGGTATATCAGTAATTGATGAAGGGAAATATTATCTTGTTGTGGAAGAT
AAGAAATATCCTGTTACTGTGTTCATATGA

Peptide Sequence

PEP ID

XP_016444823.1
PEP Infomation

PREDICTED: probable beta-D-xylosidase 7 [Nicotiana tabacum]
Sequence

MGLHKIAVITIIISFLSSIESTRPPFSCDASNPVTRTFTFCNISLPIPQRVEDLISHLNL
DEKISQLGNTAPAIPRLNISAYEWWSESLHGLTYAGEGMSFNGSIRTATQFPQIILAAST
FDEHLWYRIALAISREARAVYNTGELKGMTFFAPNINILRDPRWGRAQETAGEDPMMVGK
YGVAYVRGLQGDSFRGGKLRDGHLQASACCKHFTAQDLDRWNGHYRFTFDAQVTAQDMAD
SFQPPFKSCVEEGKATSLMCAYSRLNGVSNCANYDLLTKTVRGQWGFNGSIVSDCDAVQV
MHDHQGYTVEDAVAASLKAGMDVNCGSCVRTNARLALEKKKLQESDIDRALRNIFSIRMR
LGLFNGDPRKLEYGNISTAEVCSQEHQKLALEAARNGIVLLKNSPKLLPLSKIKTTSLAV
IGPKANDAELLLGNYAGIPCKNVSLLQGFQHIVKNIHNHPGCNFVNCTSAATHEAVDVAK
KAQYVVLIMGLDQRMERESWDRTELGLPGQQETLIKAAAKAAAEPVILVLVGGGPIDISF
AKNNPKIGGILWIGYPGEAGAAALTQIIFGEHNPGGRLPVTWYPKDFTKVPMTDMNMRPN
KTIGYPGRTYRFYKGTKVYEFGYGLSYTSYSYKIDSVNHDKVYFNNLKTDKAGKHGSLLN
VAVSDIGSEACKKAKISVKVLVKNKGKIAGKHPVLLFLRHSKVRDEVPIKQLIGFKSVHL
DAGEKTKIKFVVNPCEHFTRANEHGISVIDEGKYYLVVEDKKYPVTVFI

Transcript Sequence

Gene sequence data has not been registered.